T cells are essential to adaptive immunity and are characterized by expression of a T-cell receptor (TCR) on the cell surface. The generation of the TCR theoretically allows a diversity of more than 1015 different TCRs, of which 107 can be found within any individual. The differentiation of naïve T cells into mature T cells is triggered by antigen encounter, however the process of recruitment of T-cells from the naïve repertoire into the immune repertoire remains poorly understood.
Using an influenza virus infection model, we studied the CD8+ T cell response directed to an immunodominant peptide epitope (NP366) presented by MHC molecule H-2Db and analyzed the TCR usage in both the naïve and immune repertoire. The results showed that 25% of the naive repertoire was represented by the TRBV17+ T cell population but that this preference is not conserved in the immune repertoire (<1%). In order to understand the process of recruitment, we solved the structures of two TRBV17+ TCRs from the naïve T cell repertoire in complex with their pMHC ligand and biophysically characterized the interaction. Surprisingly, those two structures presented a 180 degrees reversed polarity compared to the conventional TCR-pMHC-I docking.
Our work suggests that in order to have efficient signal transduction, the TCR needs to bind to the pMHC in a precise orientation defined by the structural constrains of the signaling machinery.